Capabilities

  • Capabilities | Advanced -omics applied to marine organisms

    Studies on the structure of the genome of marine organisms, including gene mapping, DNA sequencing and how the complete set of RNA transcripts is produced by the genome and affected by development, diseases, or environmental factors conditioning the phenotype and particularly proteomics and metabolomics, always applying the most advanced techniques (ATAC-seq, MethylCap-Seq, RNA-seq, recombinant DNA technology, knockin and knockout CRISPR/Cas9, enhancer detector (ZED),Tol2 kit and BAC transgenic technologies, etc.).

  • Software | Kinetics of E. coli inactivation by benzalkonium chloride v1.0

    This model and associated code was developed to optimize disinfection protocols and minimize bacterial resistance. This model was applied in the following journal article: Optimization of E. coli Inactivation by Benzalkonium Chloride Reveals the Importance of Quantifying the Inoculum Effect on Chemical Disinfection. Front. Microbiol., 26 June 2018. https://doi.org/10.3389/fmicb.2018.01259

    More information and access to the code here.

  • Software | saCeSS: a parallel global optimization library

    The saCeSS library allows solving non-linear programming (NLP) and mixed-integer non-linear programming (MINLP) problems. It also offers efficient local solvers for nonlinear parameter estimation problems associated with complex models (e.g. those described by differential equations).

    More information here.

     

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