Biotechnology
Biotechnology is experiencing a rapid acceleration thanks to the advances in omic techniques and computing capacities, which allow us to better understand how we can put nature’s machinery to use for the good of humanity. Biotechnology is a broad discipline in which biological processes, cells or organisms are exploited to develop new technologies, with applications in agri- and aquaculture, food production, industrial processes and medicine.
Because of this wide range of applications, biotechnology is usually color-coded to refer to its four main fields of application. Industrial biotechnology is usually referred to as white biotechnology, while red is reserved for medical applications, green for agriculture-related developments, and blue for processes that encompass the aquatic environment.
The interdisciplinary nature of the IIM-CSIC allows us to collaborate with different industries for the application of biotechnological innovations across the whole color range of biotechnology.
You can read about all our capabilities and associated services below.
Capabilities
- Software | SYNBADm: a toolbox for automatic optimal design in synthetic biology
SYNBADm is a Matlab-based toolbox for the automatic design of biological circuits with targeted functions from component libraries.
More information here.
- Capabilities | Generation and supply of zebrafish mutants
Generation of stable zebrafish mutant and transgenic lines to use as model systems to study fish and human diseases.
- Software | AMIGO2: Advanced Modelling and Identification using Global Optimization, version 2
AMIGO2 is a MATLAB-based multiplatform toolbox designed to solve mathematical optimization problems at the core of systems biology, within the context of parametric model identification, the underlying hypothesis for model development and the optimal control of biological systems to synthetically achieve the desired behavior.
More information here.
- Software | PREMER: fast network inference with information theory
PREMER (Parallel Reverse Engineering with Mutual information & Entropy Reduction) is an open-source, multi-platform software tool for inferring network structures from data using information-theoretic measures. While this general purpose tool has been developed with biological networks in mind, it can be applied to other areas.
More information here.
- Software | BioPreDyn-bench: a suite of benchmark problems for dynamic modeling in systems biology
BioPreDyn-Bench is a suite of benchmark problems for dynamic modeling in systems biology. Currently, it contains six challenging parameter estimation problems, which aspire to serve as reference test cases in this area. This set includes medium- and large-scale kinetic models of E.coli, S. cerevisiae, D. melanogaster, Chinese Hamster Ovary (CHO) cells and a generic signaling network. The level of description includes metabolism, transcription, signal transduction and development.
More information here.
Active projects
- LIFE REFISH -
<p>Flexible biorefinery to valorise discards and by-products of the European fish and seafood production (REFISH)</p>
Principal investigator:VázquezÁlvarezXosé AntónFunding body:LIFE Environment (Nature & Circular Economy)Funding for IIM-CSIC:357637€Fromto - METDISHFISH -
<p>Terapias metabólicas para el tratamiento de enfermedades infecciosas en peces de cultivo</p>
Principal investigator:NovoaGarcíaBeatrizFunding body:Ayuda cofinanciada por el Fondo Europeo Marítimo y de Pesca y el Ministerio de Agricultura, Pesca y Alimentación.Funding for IIM-CSIC:324175€Fromto - PESCANDO 4.0 -
<p>Plataforma Blockchain e IoT para garantizar la trazabilidad, seguridad, calidad y sostenibilidad en la cadena de valor de los productos pesqueros</p>
Principal investigator:VilasFernándezCarlosFunding body:PROYECTO FINANCIADO POR EL PLAN DE RECUPERACIÓN, TRANSFORMACIÓN Y RESILIENCIA Y LOS FONDOS EUROPEOS NEXT GENERATION EU EN EL MARCO DEL REAL DECRETO 685/2021 DEL 3 DE AGOSTOFunding for IIM-CSIC:145812€Fromto - BIOTRANSFER -
<p>Polymicrobial L. monocytogenes-carrying biofilms as a key on the risk of listeriosis in foods</p>
Principal investigator:LópezCaboMartaFunding body:CSICFunding for IIM-CSIC:28557€Fromto - VALOR -
<p>Valorización integral de los efluentes y residuos de pieles generados en el proceso de producción de gelatinas marinas de alta calidad</p>
Principal investigator:VázquezÁlvarezXosé AntónFunding body:CSICFunding for IIM-CSIC:21600€Fromto - DTWINE2021 -
<p>Digital Twins to optimize energy efficiency and product quality in WINEries</p>
Principal investigator:BalsaCantoEvaFunding body:Proyecto PLEC2021-007827 financiado por MCIN/ AEI /10.13039/501100011033 y por la Unión Europea NextGenerationEU/PRTRFunding for IIM-CSIC:248164€Fromto - SEAFOOD-ID -
<p>ANALYTICAL STRATEGIES BASED ON NON-DESTRUCTIVE METHODS AND METAGENOMICS FOR THE CONTROL OF PRODUCTION METHOD AND GEOGRAPHIC ORIGIN</p>
Principal investigator:GonzálezSoteloCarmenPérezMartínRicardo IsaacFunding body:Proyecto PID2020-118012RB-C21 financiado por MCIN/ AEI /10.13039/501100011033Funding for IIM-CSIC:168000€Fromto - IMANREFIVIR -
<p>IMMUNE ANTIVIRAL RESPONSE OF FISH AGAINST RNA VIRUSES</p>
Principal investigator:NovoaGarcíaBeatrizFunding body:Proyecto PID2020-119532RB-I00 financiado por MCIN/ AEI /10.13039/501100011033Funding for IIM-CSIC:160000€Fromto - Contrato Programa -
<p>AYUDA CONVENIO ENTRE CSIC Y LA AXENCIA GALEGA DE INNOVACIÓN -GAIN- PARA EL DESARROLLO DE PROGRAMAS DE I+D+i EN LOS INSTITUTOS DE INVESTIGACIÓN DEL CSIC EN GALICIA Y EN LOS CENTROS OCEANOGRÁFICOS DEL INSTITUTO ESPAÑOL DE OCEANOGRAFÍA (CSIC-IEO). 2021-2022</p>
Principal investigator:SaboridoReyFranFunding body:Agencia Galega de InnovaciónFunding for IIM-CSIC:521824€Fromto - ISEAS -
<p>Nanopartículas con hidrolizados de colágeno marino: aplicaciones en cosmética</p>
Principal investigator:PérezMartínRicardo IsaacFunding body:CSICFunding for IIM-CSIC:52000€Fromto